Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7881

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16248 and 16249 are separated by 783 nucleotides mRNA_7880: 16248 - K02940 RP-L9e, RPL9 large subunit ribosomal protein L9e, at 1,286,203 to 1,287,208 16248 mRNA_7881: 16249 - Hypothetical Protein, at 1,287,992 to 1,288,558 16249

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,287,552 - +0.4
1,288,311 + 16249 mRNA_7881 0.56 +0.6
1,288,478 + 16249 mRNA_7881 0.86 -0.1
1,288,767 + +0.2
1,288,868 - +0.1

Or see this region's nucleotide sequence