Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8245

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16612 and 16613 are separated by 293 nucleotides16613 and 16614 are separated by 355 nucleotides mRNA_8244: 16612 - K14786 KRI1 protein KRI1, at 751,805 to 754,209 16612 mRNA_8245: 16613 - HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506, at 754,503 to 755,818 16613 mRNA_8246: 16614 - Hypothetical Protein, at 756,174 to 757,457 16614

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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754,333 + +2.5
754,377 - -0.0
754,466 - -0.0
754,511 - +0.2
754,789 - 16613 mRNA_8245 0.22 +0.4
754,944 + 16613 mRNA_8245 0.34 +1.4
755,186 + 16613 mRNA_8245 0.52 +0.3
755,781 + -0.0
755,827 - +0.4
756,806 + 16614 mRNA_8246 0.49 +0.0

Or see this region's nucleotide sequence