Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8338

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16705 and 16706 are separated by 532 nucleotides mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968,158 to 970,145 16705 mRNA_8338: 16706 - Hypothetical Protein, at 970,678 to 971,361 16706

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
969,746 - 16705 mRNA_8337 0.80 +0.6
969,895 - 16705 mRNA_8337 0.87 -0.1
969,904 + 16705 mRNA_8337 0.88 +1.9
970,019 + -0.2
970,078 + +0.1
970,083 + +0.3
970,371 + +0.9
970,375 - +0.3
970,376 + +0.7
970,377 + +0.8
970,409 + -0.6
970,431 + +0.0
970,471 + +0.6
970,487 - +0.2
970,495 + +0.3
970,503 - -0.2
970,620 - -0.0
970,793 + 16706 mRNA_8338 0.17 +0.4
971,216 - 16706 mRNA_8338 0.79 +1.0
971,218 + 16706 mRNA_8338 0.79 +0.0
971,660 - +0.5
971,671 + +0.8
971,943 - +0.8
972,119 + +0.5
972,192 - -0.1
972,205 + +0.4
972,232 - -2.6
972,252 - -1.3
972,283 - +0.1
972,296 + +0.4

Or see this region's nucleotide sequence