Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_301

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_301: 8669 - Hypothetical Protein, at 715,492 to 716,127 8669

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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714,776 + +0.7
714,850 + +0.7
714,903 - +0.1
714,915 - +1.0
714,935 + +0.9
715,735 - 8669 mRNA_301 0.38 +0.1
715,816 - 8669 mRNA_301 0.51 -0.3
716,228 - +2.1
716,231 - -0.3
716,246 - +0.3
716,429 - -0.9
716,505 - +0.6
716,551 - +0.2
716,553 - +0.5
716,559 - +0.0
716,569 + +0.4
716,701 + -0.0

Or see this region's nucleotide sequence