Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_621

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8989 and 8990 are separated by 136 nucleotides mRNA_621: 8989 - K14405 FIP1L1, FIP1 pre-mRNA 3'-end-processing factor FIP1, at 1,492,211 to 1,493,623 8989 mRNA_622: 8990 - K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23, at 1,493,760 to 1,494,779 8990

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,492,108 - +0.8
1,493,835 + +0.5

Or see this region's nucleotide sequence