Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1364

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9731 and 9732 are separated by 779 nucleotides mRNA_1363: 9731 - K11147 DHRS4 dehydrogenase/reductase SDR family member 4, at 98,069 to 99,768 9731 mRNA_1364: 9732 - SUPERFAMILY--SSF48452, at 100,548 to 102,445 9732

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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99,605 + +0.3
99,769 - +0.4
99,905 - +0.6
99,910 + +0.0
99,921 + -0.1
99,927 + +1.2
99,929 + +0.7
99,956 - +0.7
100,052 + +0.6
100,211 - +0.1
100,243 - -0.3
100,386 + +0.3
100,933 + 9732 mRNA_1364 0.20 +0.0
101,353 + 9732 mRNA_1364 0.42 +0.1
101,378 + 9732 mRNA_1364 0.44 +1.0
102,343 + +0.6
102,560 + +0.3
102,685 - -0.6
102,697 - +0.1
102,698 + +0.2
102,704 + +0.4
102,818 - -0.1
102,856 + +1.0
102,857 + -0.0

Or see this region's nucleotide sequence