Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1395

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1395: 9763 - K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase, at 166,519 to 170,946 9763

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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165,693 - +1.0
165,772 - +0.6
165,835 + +0.5
165,942 - +1.2
166,334 - +0.6
169,339 + 9763 mRNA_1395 0.64 +0.7
169,697 - 9763 mRNA_1395 0.72 +1.3
169,840 + 9763 mRNA_1395 0.75 +0.7
169,997 - 9763 mRNA_1395 0.79 +0.2
170,035 - 9763 mRNA_1395 0.79 +0.5
170,041 + 9763 mRNA_1395 0.80 +1.9
170,145 + 9763 mRNA_1395 0.82 +0.2
170,151 - 9763 mRNA_1395 0.82 -0.3
170,173 + 9763 mRNA_1395 0.83 +0.0
170,207 + 9763 mRNA_1395 0.83 +0.4
170,209 + 9763 mRNA_1395 0.83 -0.2
170,328 + 9763 mRNA_1395 0.86 +0.8
170,459 - 9763 mRNA_1395 0.89 +1.4
170,465 + 9763 mRNA_1395 0.89 +1.1
171,053 + +0.2
171,066 - +2.6
171,340 - +0.4
171,513 - +0.1
171,624 - +0.5
171,646 - +0.1
171,652 - -0.6
171,654 - +0.1
171,922 + +0.3
171,923 + +1.2
171,934 + -0.4
171,936 - +0.0
171,937 + +0.4

Or see this region's nucleotide sequence