Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1398

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9765 and 9766 are separated by 909 nucleotides mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173,685 to 176,206 9765 mRNA_1398: 9766 - Hypothetical Protein, at 177,116 to 177,574 9766

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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176,304 + -0.1
176,312 + +0.6
176,482 + +0.0
176,611 - -0.1
176,626 + +1.3
177,755 - +0.2
177,953 - -0.2
178,056 - +1.3
178,468 - +1.1
178,500 + -0.4

Or see this region's nucleotide sequence