Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1463

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9830 and 9831 are separated by 236 nucleotides9831 and 9832 are separated by 273 nucleotides mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347,942 to 349,022 9830 mRNA_1463: 9831 - K08850 AURKX aurora kinase, other, at 349,259 to 351,388 9831 mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351,662 to 352,112 9832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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349,049 - -0.2
349,088 + -0.2
349,099 + +1.3
351,535 - +0.1
351,688 - +1.6
351,907 + 9832 mRNA_1464 0.54 +0.5

Or see this region's nucleotide sequence