Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1955

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10322 and 10323 are separated by 998 nucleotides mRNA_1954: 10322 - Hypothetical Protein, at 601,425 to 602,462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603,461 to 605,817 10323

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
602,471 - +1.5
602,512 + +0.8
603,050 + -0.4
603,052 - +0.4
603,345 - +0.9
603,362 - -0.7
603,385 + +0.2
603,496 - -1.9
604,343 + 10323 mRNA_1955 0.37 -1.5
604,645 + 10323 mRNA_1955 0.50 -0.2
604,656 + 10323 mRNA_1955 0.51 +0.2
604,680 + 10323 mRNA_1955 0.52 -1.1
604,770 + 10323 mRNA_1955 0.56 -1.0
604,785 + 10323 mRNA_1955 0.56 +0.8
605,004 - 10323 mRNA_1955 0.65 +0.3
605,235 - 10323 mRNA_1955 0.75 +0.9
605,941 - +0.2
606,122 + -0.2
606,243 - -0.3
606,372 + -0.1
606,388 - +0.0
606,407 + +0.5
606,410 + +0.5
606,541 + -0.1
606,542 + +1.0
606,542 - -0.9
606,551 - +0.3
606,594 + +0.2
606,680 - -0.5
606,704 - -0.3
606,710 + -0.2

Or see this region's nucleotide sequence