Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2330

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2330: 10698 - KOG0583 Serine/threonine protein kinase, at 627,828 to 630,238 10698

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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626,888 - -1.4
626,891 - +0.2
626,996 + -1.5
627,025 - -1.2
627,030 + -0.4
627,054 + +0.5
627,172 - +0.1
627,172 + +2.2
627,189 + +0.4
627,196 - -0.8
627,213 - -0.4
627,312 - +1.2
627,324 + -0.2
627,353 - +0.3
627,373 + +0.5
627,379 + -0.2
627,487 - +0.2
627,508 + +0.7
627,609 - +0.1
627,648 + -0.9
627,665 + -0.4
627,665 + +0.5
627,683 - +0.6
627,907 - -1.7
628,826 - 10698 mRNA_2330 0.41 -0.5
629,401 + 10698 mRNA_2330 0.65 -1.3
629,519 - 10698 mRNA_2330 0.70 +0.4
630,117 - +0.8
630,247 + -0.4
630,268 + +1.2
630,271 - +0.2
630,274 - +0.6
630,275 - -0.2
630,288 + +0.6
630,409 - +0.5
630,427 - -0.9
630,434 + +0.6
630,445 - -0.2
630,460 + -0.0
630,467 + -1.1
630,474 + +0.6
630,582 + +0.6
630,588 + -0.2
630,592 - +0.0
630,601 - -0.8
630,602 + -0.1
630,603 - -2.5
630,604 + +0.5
630,605 - -1.2
630,607 - -0.0
630,608 + -0.1
630,608 - -1.2
630,609 + -0.9
630,611 - +0.5
630,613 - -2.1
630,616 - -0.7
630,617 + +0.0
630,620 + -1.7
630,620 + -0.6
630,620 - -0.3
630,621 + -0.2
630,622 + -0.7
630,622 + +0.3
630,622 + -0.8
630,625 + -0.1
630,656 + +0.0
630,658 - -1.5
630,678 + +0.2
630,709 - -0.1
630,710 - -0.3
630,710 + +1.2
630,714 - +0.3
630,727 - +0.2
630,731 - +1.1
630,732 - +0.0
630,734 + +0.7
630,735 - -0.1
630,736 + -0.3
630,736 - -0.1
630,739 - +0.4
630,750 + -1.4
630,751 - -1.5
630,755 - +0.0
630,755 + -1.5
630,757 - +0.0
630,760 - +0.4
630,764 + +0.3
630,766 + +1.5
630,767 + +0.2
630,767 + +1.3
630,771 + +0.1
630,780 + +0.5
630,985 - -0.2
631,022 - +0.7
631,032 - -0.7
631,049 - -0.6
631,053 - +1.8
631,055 + +0.1
631,058 + +1.1
631,060 - -1.1
631,070 + +0.5
631,092 + -0.7
631,130 - -0.2

Or see this region's nucleotide sequence