Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2664

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11031 and 11032 are separated by 752 nucleotides mRNA_2663: 11031 - Hypothetical Protein, at 707,646 to 708,293 11031 mRNA_2664: 11032 - Hypothetical Protein, at 709,046 to 711,250 11032

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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708,170 - 11031 mRNA_2663 0.81 +0.7
708,225 + 11031 mRNA_2663 0.89 -0.6
708,232 - +0.6
708,681 + +0.0
708,788 + -0.2
708,823 - +0.1
708,836 + -0.3
708,843 + -0.2
708,867 + +0.0
709,284 - 11032 mRNA_2664 0.11 -1.2
709,671 - 11032 mRNA_2664 0.28 -1.1
709,812 - 11032 mRNA_2664 0.35 +0.1
709,871 - 11032 mRNA_2664 0.37 +0.0
709,924 + 11032 mRNA_2664 0.40 +0.5
709,990 + 11032 mRNA_2664 0.43 -0.1
710,040 + 11032 mRNA_2664 0.45 -0.4
710,078 - 11032 mRNA_2664 0.47 -1.0
710,316 - 11032 mRNA_2664 0.58 +0.6
710,325 + 11032 mRNA_2664 0.58 -1.3
710,889 + 11032 mRNA_2664 0.84 -0.6
711,036 + +0.9
711,227 + +1.9
711,238 + -0.1
711,249 + +0.0
711,311 + -1.2
711,326 - +1.4
711,329 - -0.4
711,333 - +0.8
711,335 + -0.4
711,335 + -1.2
711,336 + -0.5
711,341 + +0.5
711,342 + +0.7
711,345 - -0.1
711,346 + +0.0
711,346 + -2.5
711,348 - -1.0
711,348 + +0.9
711,348 + +0.4
711,374 - -0.7
711,377 - -0.8
711,380 - +1.0
711,382 + +0.1
711,385 - -0.1
711,389 + -0.3
711,391 - +0.3
711,393 + -0.5
711,395 + -1.7
711,440 - +0.4
711,444 + -0.9
711,473 + -0.2
711,483 - -0.1
711,483 - -0.3
711,484 + -0.3
711,486 + -0.3
711,487 - -0.5
711,495 + -0.3
711,496 + -0.8
711,500 - -0.8
711,501 - -0.8
711,505 + +0.3
711,505 + -1.0
711,507 - -0.4
711,510 - +0.7
711,520 - -0.1
711,537 + +0.3
711,541 + +0.3
711,592 + -0.2
711,605 + -2.6
711,610 - -0.4
711,623 - +0.1
711,624 - -0.2
711,631 + -0.2
711,645 + +0.2
711,655 + -1.0
711,695 + +0.2
711,734 - -0.4
711,759 + +0.4
711,770 - +0.2
711,775 - +2.9
711,775 - -0.3
711,776 + -0.3
711,779 + -0.2
711,791 + -1.6
711,801 + -1.3
711,801 - -0.7
711,803 + -0.5
711,849 - +0.6
711,922 - +0.4
712,181 - -0.8
712,205 + -1.6
712,223 - +0.2

Or see this region's nucleotide sequence