Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3333

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11700 and 11701 are separated by 152 nucleotides11701 and 11702 are separated by 101 nucleotides mRNA_3332: 11700 - K17424 MRPL43 large subunit ribosomal protein L43, at 411,009 to 411,517 11700 mRNA_3333: 11701 - K05283 PIGW phosphatidylinositol glycan, class W, at 411,670 to 413,695 11701 mRNA_3334: 11702 - K03936 NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, at 413,797 to 414,963 11702

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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410,910 + +0.6
410,919 + +0.1
410,921 - +0.6
410,948 - -0.2
413,747 + -1.3
413,752 + +1.1
413,761 + -0.5
413,795 + -1.2

Or see this region's nucleotide sequence