Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3642

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12009 and 12010 are separated by 264 nucleotides12010 and 12011 are separated by 487 nucleotides mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230,658 to 231,997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232,262 to 233,977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234,465 to 241,327 12011

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
232,059 + +0.1
232,088 + +0.4
232,127 + +0.8
232,146 - +1.7
232,204 + -2.1
232,228 - +2.1
233,988 - -1.1
233,998 + -1.5
234,004 + -0.3
234,155 + -0.0
234,279 + -0.0
234,535 - -0.8

Or see this region's nucleotide sequence