Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4546

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12913 and 12914 are separated by 286 nucleotides mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427,882 to 428,716 12913 mRNA_4546: 12914 - K16576 ACTR10, ARP11 actin-related protein 10, at 429,003 to 431,242 12914

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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428,848 - +2.6
428,895 + +0.4
431,342 - +0.6
431,355 - +0.6
431,927 - +0.1

Or see this region's nucleotide sequence