Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4616

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12983 and 12984 are separated by 923 nucleotides12984 and 12985 are separated by 669 nucleotides mRNA_4615: 12983 - Hypothetical Protein, at 604,068 to 604,303 12983 mRNA_4616: 12984 - Hypothetical Protein, at 605,227 to 605,994 12984 mRNA_4617: 12985 - Hypothetical Protein, at 606,664 to 607,161 12985

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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604,709 - +0.4
605,990 - +0.2
606,150 - +0.4
606,152 - +1.2
606,156 - +0.3
606,156 - +0.2
606,172 + -1.0
606,308 - +0.1
606,345 - -0.4
606,880 - 12985 mRNA_4617 0.43 -2.4

Or see this region's nucleotide sequence