Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4958

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13325 and 13326 are separated by 414 nucleotides13326 and 13327 are separated by 418 nucleotides mRNA_4957: 13325 - BLAST Ribonuclease P protein subunit p20 [Hypsizygus marmor..., at 1,401,311 to 1,402,401 13325 mRNA_4958: 13326 - K02519 infB, MTIF2 translation initiation factor IF-2, at 1,402,816 to 1,406,002 13326 mRNA_4959: 13327 - K08269 ULK1_2_3, ATG1 serine/threonine-protein kinase ULK/ATG1, at 1,406,421 to 1,410,214 13327

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,402,574 - -0.2
1,402,574 + -0.2
1,406,432 - -1.6

Or see this region's nucleotide sequence