Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5184

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5184: 13552 - K03017 RPB9, POLR2I DNA-directed RNA polymerase II subunit RPB9, at 95,011 to 95,960 13552

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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94,468 + +0.1
94,479 + -0.8
94,499 + -1.4
94,610 - +0.4
94,616 + +0.1
94,621 - +0.4
94,632 + -0.6
94,633 + -1.4
94,680 - -0.8
94,762 - -0.5
94,774 - -0.7
94,907 - +1.6
94,922 + -0.3
95,807 - 13552 mRNA_5184 0.84 +0.1
95,943 + -0.4
95,948 + -0.8
95,948 + +1.9
95,961 + +1.3
95,970 + +0.2
95,985 + -0.3
95,995 + +0.7
96,094 + -0.6
96,118 + +0.2
96,119 - -1.3
96,120 + -0.4
96,126 - -1.4
96,127 - -0.1
96,127 + +0.1
96,128 + +0.1
96,146 + -0.1
96,148 - -1.0
96,149 + +0.9
96,163 + -0.3
96,253 - +0.5
96,253 + +1.6
96,262 + -1.2
96,267 + +0.1
96,280 + +0.4
96,298 + +0.9
96,317 + +0.2
96,422 - -1.1
96,425 - -1.0
96,449 + -0.5
96,585 + -0.6
96,586 + -0.5
96,601 - -0.1
96,603 + -0.3
96,606 + -0.6
96,610 + -0.6
96,702 - -0.1
96,730 - -1.0
96,732 - +0.5
96,734 - +0.7
96,736 - -0.3
96,751 + +0.0
96,757 + +0.3
96,761 - -0.8
96,765 + +0.7
96,779 - -0.5
96,784 - +0.4
96,787 + +0.2
96,792 - -0.7
96,820 + +3.1
96,896 + +0.9
96,914 + -0.6
96,932 - -0.7

Or see this region's nucleotide sequence