Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5242

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5242: 13610 - K02932 RP-L5e, RPL5 large subunit ribosomal protein L5e, at 243,253 to 244,505 13610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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242,735 - -0.1
242,741 - +1.0
242,872 + +0.4
242,874 + +0.9
242,876 + -1.9
242,877 - +1.3
242,888 + -0.9
242,900 - +0.0
243,004 - +0.1
243,013 + +0.9
243,033 - -1.3
243,045 + +0.1
243,049 - -0.7
243,052 + -1.5
245,142 + +0.3
245,303 + -1.4
245,426 - +0.3

Or see this region's nucleotide sequence