Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6140

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6140: 14508 - K20463 OSBPL3_6_7, ORP3_6_7 oxysterol-binding protein-related protein 3/6/7, at 102,447 to 105,557 14508

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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101,595 - -1.5
101,866 + -0.8
102,058 - +0.3
102,174 + -0.7
102,245 - +0.5
102,642 + -1.0
102,770 + 14508 mRNA_6140 0.10 +1.0
103,014 - 14508 mRNA_6140 0.18 -0.4
103,108 + 14508 mRNA_6140 0.21 -0.2
103,144 + 14508 mRNA_6140 0.22 -0.1
103,166 + 14508 mRNA_6140 0.23 +0.4
103,398 + 14508 mRNA_6140 0.31 -0.6
103,996 - 14508 mRNA_6140 0.50 -0.3
104,080 - 14508 mRNA_6140 0.52 +0.3
104,347 + 14508 mRNA_6140 0.61 -0.8
105,349 + +0.0
105,453 - -0.1
105,482 - -1.0
105,505 - -1.4
105,648 + +0.9
105,657 + +1.9
105,769 - +0.1
105,791 - -0.4
105,801 - -0.2
105,818 + -0.2
105,823 + +1.7
105,825 - +0.5
105,829 - -0.7
105,830 + -0.7
105,839 - +0.6
105,841 - -1.0
105,842 + +1.2
105,850 - -0.1
105,851 + -0.6
105,851 + -1.5
105,858 + -0.1
105,867 - -0.2
105,871 - +0.2
105,882 - +0.0
105,996 + -0.0
106,003 + -0.0
106,080 - -0.9
106,316 - -0.6

Or see this region's nucleotide sequence