Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6209

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252,444 to 258,337 14577

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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251,589 - -0.2
251,605 + +1.6
251,630 + -1.4
251,634 + +0.5
251,712 + -0.7
251,734 - -0.9
251,888 + +0.0
251,913 + -1.6
252,328 + +0.0
258,418 + -1.5
258,518 + -0.6
258,530 - -1.1
258,555 - +0.1
258,683 - +0.0
258,684 - -1.4
258,703 - -1.7
258,708 + -1.1
258,857 - -0.8
258,986 + -0.3
258,989 + +1.0
259,000 + -0.9
259,012 + +0.1
259,283 + -2.6
259,301 + -0.6

Or see this region's nucleotide sequence