Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6377

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6377: 14745 - BLAST Williams-Beuren syndrome critical region protein 25 [..., at 673,553 to 674,016 14745

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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672,558 - +0.2
673,764 - 14745 mRNA_6377 0.45 -0.2
673,904 + 14745 mRNA_6377 0.76 +1.1
673,921 + 14745 mRNA_6377 0.79 +1.6
673,944 - 14745 mRNA_6377 0.84 +0.1
673,960 + 14745 mRNA_6377 0.88 +1.0
673,965 + 14745 mRNA_6377 0.89 -1.8
674,051 - +0.0
674,062 + +0.6
674,062 - -0.1
674,063 + +0.4
674,064 + +0.3
674,065 + -0.3
674,073 - -1.0
674,075 + -0.2
674,075 + -0.5
674,076 - -2.5
674,081 + -0.0
674,081 + +0.3
674,082 - +1.0
674,089 + -0.3
674,096 + +1.8
674,097 + -0.4
674,097 + -1.4
674,108 + +0.5
674,113 - -1.3
674,131 + -0.5
674,135 + -0.5
674,202 - -0.5
674,254 - -0.7
674,271 - -0.2
674,279 - -2.2
674,429 - +0.3
674,583 + +0.4

Or see this region's nucleotide sequence