Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6595

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14962 and 14963 are separated by 533 nucleotides14963 and 14964 are separated by 606 nucleotides mRNA_6594: 14962 - Hypothetical Protein, at 1,185,116 to 1,185,583 14962 mRNA_6595: 14963 - Hypothetical Protein, at 1,186,117 to 1,188,115 14963 mRNA_6596: 14964 - K02898 RP-L26e, RPL26 large subunit ribosomal protein L26e, at 1,188,722 to 1,189,902 14964

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,185,131 + -0.1
1,185,134 + -1.9
1,185,149 + +0.2
1,185,258 - 14962 mRNA_6594 0.30 +1.8
1,185,854 + +0.4
1,185,957 - -0.3
1,185,986 - +0.0
1,186,399 - 14963 mRNA_6595 0.14 +0.4
1,186,412 + 14963 mRNA_6595 0.15 +0.2
1,186,419 + 14963 mRNA_6595 0.15 -0.3
1,186,424 - 14963 mRNA_6595 0.15 +0.5
1,186,425 + 14963 mRNA_6595 0.15 -0.2
1,186,576 + 14963 mRNA_6595 0.23 +0.8
1,186,827 + 14963 mRNA_6595 0.36 -0.7
1,186,839 - 14963 mRNA_6595 0.36 -0.4
1,187,593 + 14963 mRNA_6595 0.74 -0.3
1,187,598 - 14963 mRNA_6595 0.74 -0.4
1,188,031 + -0.4
1,188,052 - +0.0
1,188,330 + +2.0
1,188,331 + +0.2
1,188,347 + +1.0
1,188,597 + +0.5
1,188,611 + -0.4
1,188,621 - -0.2
1,188,636 - +0.1
1,188,648 - +1.5

Or see this region's nucleotide sequence