Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6599

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14966 and 14967 are separated by 63 nucleotides mRNA_6598: 14966 - K11518 TOM40 mitochondrial import receptor subunit TOM40, at 1,192,910 to 1,194,373 14966 mRNA_6599: 14967 - Hypothetical Protein, at 1,194,437 to 1,195,925 14967

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,194,519 + +0.5
1,194,788 - 14967 mRNA_6599 0.24 -1.1
1,194,800 + 14967 mRNA_6599 0.24 +0.1
1,194,815 + 14967 mRNA_6599 0.25 +1.8
1,195,124 + 14967 mRNA_6599 0.46 +0.7
1,195,215 + 14967 mRNA_6599 0.52 -0.4
1,195,374 - 14967 mRNA_6599 0.63 +0.7
1,195,381 + 14967 mRNA_6599 0.63 -0.2
1,195,663 - 14967 mRNA_6599 0.82 +0.4
1,195,803 - -0.9
1,195,822 + -0.3
1,195,943 + +0.7
1,195,962 - -0.0
1,196,297 - +0.7
1,196,305 - -1.6
1,196,410 + +1.0
1,196,546 + -0.2
1,196,548 + -0.0
1,196,552 - +1.0
1,196,554 + +0.1
1,196,828 + -0.0
1,196,834 - -0.5

Or see this region's nucleotide sequence