Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6715

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15083 and 15084 are separated by 265 nucleotides mRNA_6715: 15083 - K13989 DERL2_3 Derlin-2/3, at 1,521,694 to 1,522,877 15083 mRNA_6716: 15084 - Hypothetical Protein, at 1,523,143 to 1,524,181 15084

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,521,318 + -1.3
1,521,574 + +0.8
1,521,672 - +0.4
1,521,728 + -0.2
1,521,777 - +0.3
1,521,859 + 15083 mRNA_6715 0.14 +0.4
1,522,308 + 15083 mRNA_6715 0.52 -1.0
1,522,479 + 15083 mRNA_6715 0.66 -0.0
1,522,601 - 15083 mRNA_6715 0.77 -0.2
1,522,621 + 15083 mRNA_6715 0.78 +0.3
1,522,647 + 15083 mRNA_6715 0.80 -1.1
1,522,738 + 15083 mRNA_6715 0.88 -0.6
1,522,744 - 15083 mRNA_6715 0.89 +0.1
1,522,771 - -0.4
1,522,772 + -1.2
1,522,870 + -0.0
1,522,872 - -0.2
1,523,003 - +1.0
1,523,010 + -0.3
1,523,010 + +0.8
1,523,019 + +0.0
1,523,020 + -0.3
1,523,042 + -0.9
1,523,066 + -0.3
1,523,075 - +1.3
1,523,077 + +0.4
1,523,347 - 15084 mRNA_6716 0.20 +0.2
1,523,375 - 15084 mRNA_6716 0.22 +0.4
1,523,507 - 15084 mRNA_6716 0.35 +0.8

Or see this region's nucleotide sequence