Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6764

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15132 and 15133 are separated by 181 nucleotides mRNA_6764: 15132 - K12273 SEC66 translocation protein SEC66, at 85,299 to 86,536 15132 mRNA_6765: 15133 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 86,718 to 88,049 15133

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
84,618 - -1.6
84,795 - -0.1
84,797 + +0.5
84,950 + +1.2
84,957 - +0.4
84,971 - +0.5
85,086 + +0.1
85,103 + +0.8
85,105 + -1.2
85,114 - -0.2
85,224 - -0.4
85,227 - -0.7
85,241 - +0.3
85,264 - -0.8
86,418 + -1.4
86,553 + -1.5
86,554 - -1.1
86,686 + +0.0
86,687 - -2.7
86,690 - -0.3
86,695 + -0.3
86,709 + -0.2
86,853 - 15133 mRNA_6765 0.10 +0.1
86,979 + 15133 mRNA_6765 0.20 -0.4
86,988 - 15133 mRNA_6765 0.20 -0.1
86,991 + 15133 mRNA_6765 0.20 +0.1
86,993 - 15133 mRNA_6765 0.21 +0.4
87,122 - 15133 mRNA_6765 0.30 +0.2
87,316 - 15133 mRNA_6765 0.45 +0.1

Or see this region's nucleotide sequence