Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7145

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15512 and 15513 are separated by 442 nucleotides15513 and 15514 are separated by 646 nucleotides mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988,436 to 990,722 15512 mRNA_7145: 15513 - BLAST putative ccch zinc finger dna binding protein [Eu..., at 991,165 to 992,673 15513 mRNA_7146: 15514 - Hypothetical Protein, at 993,320 to 994,345 15514

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
990,289 + 15512 mRNA_7144 0.81 -0.2
990,447 - 15512 mRNA_7144 0.88 +0.2
990,595 + +0.2
990,867 - +0.2
990,963 + -2.3
991,313 + +1.4
991,525 + 15513 mRNA_7145 0.24 +0.2
991,744 + 15513 mRNA_7145 0.38 -0.3
991,749 + 15513 mRNA_7145 0.39 -1.0
991,801 + 15513 mRNA_7145 0.42 -0.9
991,892 + 15513 mRNA_7145 0.48 -2.0
991,938 + 15513 mRNA_7145 0.51 -0.6
992,178 + 15513 mRNA_7145 0.67 +1.4
992,351 - 15513 mRNA_7145 0.79 -0.1
992,496 + 15513 mRNA_7145 0.88 +0.2
992,968 + +0.4
993,084 - +0.6
993,113 + +0.4

Or see this region's nucleotide sequence