Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7406

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15773 and 15774 are separated by 745 nucleotides15774 and 15775 are separated by 581 nucleotides mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198,877 to 199,727 15773 mRNA_7406: 15774 - Hypothetical Protein, at 200,473 to 201,495 15774 mRNA_7407: 15775 - Hypothetical Protein, at 202,077 to 204,575 15775

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
199,765 + +0.1
199,905 + +0.1
199,906 + -2.3
200,050 + -1.1
200,086 + +0.9
200,098 - +0.2
200,102 + +0.3
200,182 + +0.1
200,188 + -0.4
200,195 + +0.0
200,205 + -1.3
200,234 - -0.1
200,262 + +0.9
200,284 + +0.3
200,296 + -1.9
200,327 - -0.0
200,330 + -0.5
200,396 - -1.0
200,413 - +1.6
200,413 - -0.4
200,426 + +0.2
200,429 - -1.2
200,459 + +0.8
200,619 - 15774 mRNA_7406 0.14 +0.3
200,703 - 15774 mRNA_7406 0.22 -1.5
200,756 + 15774 mRNA_7406 0.28 +1.4
200,900 + 15774 mRNA_7406 0.42 -0.6
201,634 + -0.2
201,646 + -0.3
201,767 - +0.3
201,770 + -2.0
202,099 + -0.5

Or see this region's nucleotide sequence