Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7705

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16072 and 16073 are separated by 181 nucleotides mRNA_7704: 16072 - K02214 CDC7 cell division control protein 7, at 888,011 to 890,440 16072 mRNA_7705: 16073 - Hypothetical Protein, at 890,622 to 891,361 16073

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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890,437 + +1.1
890,454 - +0.4
890,481 + -0.4
890,524 - -0.1
890,610 + -0.0
890,631 + +1.5
890,709 - 16073 mRNA_7705 0.12 -0.2
890,747 - 16073 mRNA_7705 0.17 -0.1
890,883 - 16073 mRNA_7705 0.35 -0.8
890,885 - 16073 mRNA_7705 0.36 -1.4
890,994 + 16073 mRNA_7705 0.50 -0.1
891,011 - 16073 mRNA_7705 0.53 -0.2
891,225 - 16073 mRNA_7705 0.81 -0.9
891,270 + 16073 mRNA_7705 0.88 +1.9
891,276 - 16073 mRNA_7705 0.88 -0.1
891,434 + -1.4
891,461 - -0.2
891,534 - +0.0
891,564 + +0.8
891,570 + +0.0
891,610 - +0.3
891,636 + -0.5
891,703 + +0.8
891,715 - -0.2
891,721 + -0.1
891,723 + +0.2
891,739 - +0.1
891,740 + -0.2
891,745 - -0.6
891,759 + -2.4
891,761 - -0.3
891,780 - -0.3
891,791 - +0.9
891,849 - -1.3
891,853 - +0.3
891,864 + -0.1
891,873 - +0.5
891,877 + -0.3
891,882 - +0.2
891,931 - +0.4
891,931 - +1.2
891,933 - +0.3
891,934 + -0.7
891,937 - -0.6
891,941 - -0.7
891,956 - -0.9
891,964 + -0.5
891,968 + +1.3
891,973 - -0.2
891,975 + +0.8
891,982 - -0.6
891,997 + +1.5
892,014 - -0.1
892,104 - +1.2
892,105 - +0.8
892,114 + -1.0
892,133 - -0.1
892,242 + -0.3
892,261 + +0.5
892,268 - -0.6
892,296 + -0.1

Or see this region's nucleotide sequence