Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8008

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16376 and 16377 are separated by 469 nucleotides mRNA_8008: 16376 - BLAST CAMK/CAMKL protein kinase [Microbotryum lychnidis-dio..., at 202,632 to 203,729 16376 mRNA_8009: 16377 - K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase, at 204,199 to 205,713 16377

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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202,559 + +0.4
203,342 + 16376 mRNA_8008 0.65 -0.7

Or see this region's nucleotide sequence