Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8046

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16413 and 16414 are separated by 302 nucleotides16414 and 16415 are separated by 113 nucleotides mRNA_8045: 16413 - Hypothetical Protein, at 294,906 to 295,366 16413 mRNA_8046: 16414 - BLAST myosin tail domain protein [Rhizoctonia solani AG-3 R..., at 295,669 to 297,549 16414 mRNA_8047: 16415 - K08744 CRLS cardiolipin synthase (CMP-forming), at 297,663 to 298,822 16415

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
294,800 - -0.2
294,931 - +0.7
295,095 + 16413 mRNA_8045 0.41 -0.3
295,096 + 16413 mRNA_8045 0.41 -1.1
295,104 - 16413 mRNA_8045 0.43 +0.4
295,196 - 16413 mRNA_8045 0.63 +1.4
295,226 - 16413 mRNA_8045 0.69 -0.2
295,297 + 16413 mRNA_8045 0.85 +1.0
295,366 - +0.0
295,525 - +0.2
295,703 - -0.4
295,835 + -1.5
296,414 + 16414 mRNA_8046 0.40 +0.2
296,453 + 16414 mRNA_8046 0.42 +1.3
296,458 - 16414 mRNA_8046 0.42 -0.7
296,862 - 16414 mRNA_8046 0.63 -1.0
297,011 - 16414 mRNA_8046 0.71 -1.5
297,100 - 16414 mRNA_8046 0.76 -1.7
297,314 - 16414 mRNA_8046 0.87 +1.8
297,319 - 16414 mRNA_8046 0.88 +0.4
297,323 + 16414 mRNA_8046 0.88 +0.3
297,326 + 16414 mRNA_8046 0.88 -1.4
297,442 - -1.5
297,445 + -0.2
297,475 - +0.9
297,616 + -0.8
297,624 - -0.0
297,624 + -0.8

Or see this region's nucleotide sequence