Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8257

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16624 and 16625 are separated by 249 nucleotides16625 and 16626 are separated by 571 nucleotides mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779,592 to 781,358 16624 mRNA_8257: 16625 - Hypothetical Protein, at 781,608 to 783,026 16625 mRNA_8258: 16626 - Hypothetical Protein, at 783,598 to 784,234 16626

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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781,449 - +0.1
781,622 - -0.3
782,083 - 16625 mRNA_8257 0.33 +0.2
782,084 + 16625 mRNA_8257 0.34 +0.7
782,382 - 16625 mRNA_8257 0.55 -0.7
782,920 - -1.8
783,691 - 16626 mRNA_8258 0.15 -1.1
783,982 + 16626 mRNA_8258 0.60 -0.1

Or see this region's nucleotide sequence