Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_788

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9155 and 9156 are separated by 285 nucleotides9156 and 9157 are separated by 380 nucleotides mRNA_787: 9155 - K17804 TIM44 mitochondrial import inner membrane translocase subunit TIM44, at 1,870,363 to 1,872,119 9155 mRNA_788: 9156 - Hypothetical Protein, at 1,872,405 to 1,873,287 9156 mRNA_789: 9157 - K14459 HEX hexosaminidase, at 1,873,668 to 1,877,392 9157

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,872,372 - -0.0
1,872,653 - 9156 mRNA_788 0.28 +0.3
1,873,240 - +0.1
1,873,366 - -0.3
1,873,426 - -0.7
1,873,521 + +2.1
1,873,534 + +0.1
1,873,537 + -0.2
1,873,537 + -0.7
1,873,539 + -0.1
1,873,553 - +2.2
1,873,554 + -0.3
1,873,612 - +0.8
1,873,635 - +0.5
1,873,635 - -0.2
1,873,636 + +0.2
1,873,638 + -0.1
1,873,641 - -0.1
1,873,648 - +0.1
1,873,795 + -0.4
1,873,809 + -1.9
1,873,918 + -0.0
1,874,057 - 9157 mRNA_789 0.10 +0.3
1,874,088 - 9157 mRNA_789 0.11 +0.0
1,874,220 + 9157 mRNA_789 0.15 -0.4

Or see this region's nucleotide sequence