Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1233

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9600 and 9601 are separated by 226 nucleotides9601 and 9602 are separated by 506 nucleotides mRNA_1232: 9600 - K12177 COPS3, CSN3 COP9 signalosome complex subunit 3, at 710,443 to 712,961 9600 mRNA_1233: 9601 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 713,188 to 714,152 9601 mRNA_1234: 9602 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 714,659 to 715,622 9602

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
712,275 - 9600 mRNA_1232 0.73 +0.7
712,669 + 9600 mRNA_1232 0.88 -0.4
713,010 - -0.4
713,053 + +0.4
713,132 + -0.2
713,289 - 9601 mRNA_1233 0.10 +0.3
714,308 + +1.3
714,355 + -0.6
714,888 - 9602 mRNA_1234 0.24 -0.6

Or see this region's nucleotide sequence