Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1305

Experiment: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1305: 9673 - Hypothetical Protein, at 879,704 to 880,783 9673

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
878,957 + -0.5
878,974 + +0.1
878,995 + +0.5
878,997 + -0.4
879,125 + -0.2
879,298 - +0.3
879,309 + -0.7
879,313 + +0.1
879,590 + -0.6
879,595 - -0.3
879,621 - -0.6
879,629 - +2.6
879,631 + -0.5
879,641 + +0.3
879,739 - +0.0
879,807 + -0.2
879,931 + 9673 mRNA_1305 0.21 +0.2
880,077 - 9673 mRNA_1305 0.35 +0.1
880,194 - 9673 mRNA_1305 0.45 -1.5
880,392 + 9673 mRNA_1305 0.64 +0.1
880,485 - 9673 mRNA_1305 0.72 -0.6
880,542 - 9673 mRNA_1305 0.78 +0.1
880,682 + -1.0
880,684 - +0.8
880,742 - -0.9
880,764 - +0.4
880,775 - -0.3
880,826 + -1.3
880,872 + -0.4
880,962 - +0.3
880,975 - +0.0
881,000 - -0.6
881,139 - -0.7
881,139 - +0.2
881,148 + -1.2
881,259 + -0.7
881,261 - +0.1
881,272 - -2.5
881,311 + -2.0
881,313 + -0.8
881,418 - -1.1
881,420 - +0.2
881,432 + -1.1
881,437 + -1.9
881,450 - -1.2
881,452 - +0.1
881,460 + +0.6
881,547 + +1.1

Or see this region's nucleotide sequence