Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1651

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10018 and 10019 are separated by 193 nucleotides10019 and 10020 are separated by 567 nucleotides mRNA_1650: 10018 - KOG0254 Predicted transporter (major facilitator superfamily), at 807,576 to 811,155 10018 mRNA_1651: 10019 - SUPERFAMILY--SSF69047, at 811,349 to 811,874 10019 mRNA_1652: 10020 - Hypothetical Protein, at 812,442 to 813,114 10020

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
810,749 + 10018 mRNA_1650 0.89 -1.8
811,769 - 10019 mRNA_1651 0.80 +0.3
811,877 + -0.1
811,938 + -3.9
811,946 - -1.4
812,244 + -0.1
812,281 + +2.2
812,497 - +0.0
812,499 - -0.2
812,499 + +0.2
812,503 + +1.0
812,507 + -0.4
812,517 - 10020 mRNA_1652 0.11 +0.9
812,671 + 10020 mRNA_1652 0.34 -0.2
812,836 + 10020 mRNA_1652 0.59 -1.1

Or see this region's nucleotide sequence