Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1742

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10110 and 10111 are separated by 395 nucleotides mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94,671 to 96,223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96,619 to 100,637 10111

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
93,680 - +0.6
93,680 - +0.3
93,681 - -1.7
93,684 - +0.1
93,684 - +1.0
93,687 + -0.3
93,692 + +0.0
93,710 + -0.7
93,725 - +1.0
93,735 - +1.5
93,739 - +0.2
93,747 - -1.5
93,776 - -0.0
93,810 + +0.6
93,811 + -1.1
93,844 - -1.4
93,861 + -0.2
93,865 + +1.1
93,884 + -0.2
93,885 - +0.2
93,887 - -0.1
93,887 - +0.6
93,888 - +0.0
93,890 + -0.2
93,890 + -0.0
93,896 + -1.5
93,901 + +0.2
93,902 - +0.2
93,923 + +1.4
93,937 - +0.3
94,030 - +0.1
94,030 + -0.2
94,035 + +0.7
94,038 + -1.9
94,044 - +0.1
94,055 + +0.5
94,056 - -1.1
94,062 + -0.8
94,065 - -0.5
94,097 + +2.0
94,100 + -0.0
94,100 + -1.3
94,106 + -0.8
94,137 + +1.2
94,141 + +0.6
94,144 - +0.1
94,150 + +0.8
94,150 + +1.1
94,156 + -1.1
94,156 + +0.6
94,165 + +2.1
94,171 - +0.1
94,197 - +0.2
94,214 - -0.3
94,223 - +1.8
94,224 + -0.1
94,243 - +0.3
94,256 - -0.3
94,262 + -0.8
94,266 - +0.2
94,278 + +0.0
94,281 - -0.2
94,282 + -0.6
94,289 - +0.6
94,294 + -0.1
94,296 + +0.5
94,296 + -0.2
94,300 + +0.2
94,333 - +1.1
94,383 + +1.9
94,390 - +1.8
94,397 + +0.6
94,413 - -1.8
94,415 - -1.8
94,421 + +0.3
94,423 - -0.7
94,428 + +1.1
94,440 + +1.1
94,442 - -1.4
94,443 + +0.1
94,444 - +0.2
94,444 + +0.6
94,468 - -0.1
94,470 - +0.6
94,538 - +0.8
94,547 + -0.2
94,584 - +0.8
94,590 - +0.1
94,591 + -0.8
94,593 + -0.4
94,611 + +0.4
94,700 - +0.4
94,714 - -1.2
94,718 + +0.9
94,726 + +0.7
94,734 - -0.4
94,752 - +0.6
94,753 + +0.6
94,884 - 10110 mRNA_1742 0.14 +0.8
95,096 + 10110 mRNA_1742 0.27 +0.7
95,508 + 10110 mRNA_1742 0.54 +1.6
95,615 - 10110 mRNA_1742 0.61 +0.6
95,641 + 10110 mRNA_1742 0.62 -1.1
96,365 - -1.2
96,385 + +0.2
96,402 - -1.1
96,545 - +0.5
96,548 + +1.3
96,870 - -0.0
97,029 + 10111 mRNA_1743 0.10 -1.8
97,152 - 10111 mRNA_1743 0.13 +0.6

Or see this region's nucleotide sequence