Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1937

Experiment: Sorted No BODIPY Gate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	Sorted No BODIPY Gate
553,466	+	10304	mRNA_1936	0.86	+0.5
553,727	-				+1.0
553,734	-				+0.5
553,865	+				-0.5
553,868	+				-0.6
553,890	-				-1.5
553,893	+				-1.1
553,903	+				+0.3
553,909	-				-0.6
553,916	+				+0.1
553,945	-				-2.2
553,981	-				-1.9
554,011	+				-0.2
554,025	+				-0.9
554,029	-				-1.4
554,038	-				-0.1
554,040	+				-0.4
554,040	+				+0.7
554,046	+				-3.3
554,064	+				+1.1
554,069	+				+0.0
554,074	+				+1.3
554,084	+				+0.3
554,096	+				-0.3
554,105	+				+0.6
554,147	-				+0.4
554,147	-				-0.6
554,149	-				-0.2
554,165	-				+0.0
554,165	-				-0.6
554,165	+				+0.0
554,174	-				-1.0
554,185	+				-1.5
554,326	-				+0.4
554,334	-				+0.9
554,336	+				+2.5
554,349	+				+0.4
554,350	+				+0.5
554,361	+				-1.5
554,367	+				-0.9
554,470	+				-1.1
554,816	-	10305	mRNA_1937	0.26	-0.9
555,084	-	10305	mRNA_1937	0.42	-4.0
556,233	+				-0.5
556,233	-				+0.0
556,259	-				+0.5
556,395	-				-0.1
556,401	-				+1.0
556,431	+				-0.0
556,535	+				-0.0
556,538	+				+0.1
556,546	+				-0.0
556,691	-				+0.7
556,879	-	10306	mRNA_1938	0.18	-0.1
556,948	+	10306	mRNA_1938	0.22	+0.2
556,995	+	10306	mRNA_1938	0.25	-1.1