Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2348

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10716 and 10717 are separated by 282 nucleotides mRNA_2348: 10716 - K00762 pyrE orotate phosphoribosyltransferase, at 682,328 to 683,011 10716 mRNA_2349: 10717 - KOG3419 Mitochondrial/chloroplast ribosomal protein S16, at 683,294 to 683,869 10717

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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681,390 - -0.6
681,395 + +1.6
681,401 - +0.4
681,405 + -0.6
681,407 - -0.7
681,407 - +0.1
681,422 + +0.7
681,427 + -0.0
681,449 + +0.1
681,497 + -0.1
681,714 + -0.2
681,749 - -2.0
681,836 - +0.3
682,032 + -0.1
682,048 + +0.1
682,222 - -0.8
682,327 - -0.6
683,098 + -1.0
683,260 - +0.1

Or see this region's nucleotide sequence