Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2997

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11364 and 11365 are separated by 173 nucleotides11365 and 11366 are separated by 182 nucleotides mRNA_2996: 11364 - Hypothetical Protein, at 37,820 to 39,043 11364 mRNA_2997: 11365 - K14768 UTP7, WDR46 U3 small nucleolar RNA-associated protein 7, at 39,217 to 41,331 11365 mRNA_2998: 11366 - KOG3383 Uncharacterized conserved protein, at 41,514 to 42,818 11366

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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39,055 - -0.1
39,066 + -1.2
39,201 - +1.6
39,202 + +0.4
39,208 + +0.9
39,237 - -0.3
41,387 + +0.1
41,392 + -0.5
41,474 + +0.4
41,479 - -0.7
41,531 + -0.6
41,644 - -0.6
41,783 + 11366 mRNA_2998 0.21 +1.8
41,918 - 11366 mRNA_2998 0.31 +0.6
41,944 + 11366 mRNA_2998 0.33 -3.1
42,217 + 11366 mRNA_2998 0.54 +0.9
42,221 - 11366 mRNA_2998 0.54 -1.5
42,227 - 11366 mRNA_2998 0.55 +0.9

Or see this region's nucleotide sequence