Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3293

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11661 and 11662 are separated by 13 nucleotides mRNA_3293: 11661 - K01440 PNC1 nicotinamidase, at 318,203 to 319,692 11661 mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319,706 to 321,575 11662

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
317,285 - -1.9
317,319 + +1.2
317,331 + -1.3
317,418 - +1.2
317,488 + -0.7
317,492 - -0.3
317,788 + -0.8
317,890 + +0.6
317,931 - +0.2
317,946 - -1.6
317,954 - +0.2
318,113 + -2.3
318,128 + +0.0
318,137 - +0.2
318,148 + +1.0
318,234 - +1.5
318,248 - -0.1
318,249 + -0.6
318,255 + +1.9
318,257 - -1.9
318,257 + -2.0
318,271 - +0.4
318,272 + +0.7
318,277 + +0.4
318,417 - 11661 mRNA_3293 0.14 -0.7
318,425 + 11661 mRNA_3293 0.15 -0.7
318,431 + 11661 mRNA_3293 0.15 +1.3
318,435 + 11661 mRNA_3293 0.16 +0.5
318,451 + 11661 mRNA_3293 0.17 +0.4
318,454 + 11661 mRNA_3293 0.17 -0.2
318,574 - 11661 mRNA_3293 0.25 -0.1
318,577 - 11661 mRNA_3293 0.25 +0.9
318,690 - 11661 mRNA_3293 0.33 -0.7
318,773 + 11661 mRNA_3293 0.38 +0.6
318,774 + 11661 mRNA_3293 0.38 +0.3
319,142 - 11661 mRNA_3293 0.63 -0.5
319,157 + 11661 mRNA_3293 0.64 +0.2
319,309 + 11661 mRNA_3293 0.74 -0.2
319,322 - 11661 mRNA_3293 0.75 -1.1
319,333 + 11661 mRNA_3293 0.76 +0.5
319,334 + 11661 mRNA_3293 0.76 +0.3
319,853 + -2.2

Or see this region's nucleotide sequence