Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3430

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11798 and 11799 are separated by 266 nucleotides mRNA_3430: 11798 - Hypothetical Protein, at 81,829 to 82,404 11798 mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82,671 to 85,458 11799

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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82,311 + 11798 mRNA_3430 0.84 +0.1
82,319 - 11798 mRNA_3430 0.85 +0.3
82,322 + 11798 mRNA_3430 0.86 -0.9
82,326 - 11798 mRNA_3430 0.86 -2.0
82,328 - 11798 mRNA_3430 0.87 +1.2
82,331 - 11798 mRNA_3430 0.87 -0.3
82,348 - +0.6
82,360 + -0.9
82,373 + -0.9
82,491 - +0.5
82,496 + -0.0
82,499 + +0.3
82,509 + +0.2
82,513 + +1.0
82,513 - +0.6
82,568 - +0.5
82,583 + +0.2
82,593 - +0.6
82,594 - +2.7
82,610 - -2.1
82,633 + -1.3
82,638 + +0.9
82,645 + -0.5
82,652 - -0.0
82,677 + -0.2
82,760 - +1.0
82,781 + -2.1
82,784 - +0.0
82,784 + +1.0
82,785 + +1.1
82,812 - -0.7
83,247 + 11799 mRNA_3431 0.21 -0.2

Or see this region's nucleotide sequence