Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3675

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12042 and 12043 are separated by 477 nucleotides mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314,540 to 316,836 12042 mRNA_3675: 12043 - K11251 H2A histone H2A, at 317,314 to 317,987 12043

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
316,536 + 12042 mRNA_3674 0.87 -0.2
316,969 - +0.3
316,969 - +1.1
317,135 - +0.5
317,153 + -2.5
317,391 - 12043 mRNA_3675 0.11 -1.2
317,592 + 12043 mRNA_3675 0.41 +0.7
317,597 + 12043 mRNA_3675 0.42 -0.2
317,611 + 12043 mRNA_3675 0.44 +0.5
317,911 + 12043 mRNA_3675 0.89 +0.3
318,190 + -0.4
318,345 + -0.7
318,871 + +0.9

Or see this region's nucleotide sequence