Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4957

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13324 and 13325 are separated by 578 nucleotides13325 and 13326 are separated by 414 nucleotides mRNA_4956: 13324 - HMMPfam-SMI1 / KNR4 family (SUKH-1)-PF09346, at 1,398,453 to 1,400,732 13324 mRNA_4957: 13325 - BLAST Ribonuclease P protein subunit p20 [Hypsizygus marmor..., at 1,401,311 to 1,402,401 13325 mRNA_4958: 13326 - K02519 infB, MTIF2 translation initiation factor IF-2, at 1,402,816 to 1,406,002 13326

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,400,659 - -1.3
1,400,670 + -1.0
1,400,943 - -0.6
1,401,100 - -0.2
1,401,227 + +1.1
1,401,241 - -0.1
1,401,252 + +0.1
1,402,574 - -0.7
1,402,574 + +1.1

Or see this region's nucleotide sequence