Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5754

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14121 and 14122 are separated by 192 nucleotides mRNA_5753: 14121 - K17267 COPG coatomer subunit gamma, at 860,617 to 864,021 14121 mRNA_5754: 14122 - KOG1721 FOG Zn-finger, at 864,214 to 867,057 14122

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
864,013 - +0.8
864,202 - +1.6
864,954 + 14122 mRNA_5754 0.26 -0.4
865,084 - 14122 mRNA_5754 0.31 -2.2
865,215 + 14122 mRNA_5754 0.35 -0.3
865,988 + 14122 mRNA_5754 0.62 -0.1
866,081 - 14122 mRNA_5754 0.66 +0.6
866,245 - 14122 mRNA_5754 0.71 -0.6
866,252 + 14122 mRNA_5754 0.72 +2.0
866,334 + 14122 mRNA_5754 0.75 +1.5
866,845 - -0.2
866,970 + -0.9
866,980 + +0.1
867,005 - +1.1
867,133 + +0.0
867,164 - -2.2
867,270 - -0.1
867,301 + +0.6
867,309 + -1.2
867,310 - +1.0
867,319 - +0.5
867,324 + +0.6
867,431 - +0.2
867,454 - +1.2
867,491 - +1.6
867,505 + +0.1
867,510 - +0.5
867,518 + -0.5
867,619 - +0.4
867,630 - +0.4
867,634 + -0.9
867,635 - +0.5
867,636 - -2.9
867,637 - -0.5
867,638 + -2.5
867,641 + -0.1
867,645 + +1.0
867,647 - +0.5
867,648 - -0.3
867,650 + +0.3
867,651 - +0.8
867,653 - +0.5
867,653 - -0.3
867,655 - +0.3
867,655 - +0.5
867,656 - -0.2
867,657 + -1.3
867,662 + +0.3
867,663 + +1.4
867,663 - -0.7
867,663 + +0.4
867,663 + +0.5
867,664 - +0.8
867,664 + +0.5
867,667 - +0.4
867,668 + -1.7
867,670 + +0.1
867,671 + +1.2
867,674 + +0.6
867,675 - -0.1
867,678 + -2.1
867,691 - -0.4
867,713 + -0.4
867,722 + +0.1
867,727 - -0.2
867,731 + +0.2
867,741 - +1.0
867,741 - +0.1
867,742 + +0.9
867,742 + -1.0
867,745 + +0.6
867,746 + +0.3
867,749 + +0.6
867,750 - -1.0
867,762 - -0.4
867,766 - -0.4
867,769 + +0.7
867,880 + +0.7
867,906 + +0.6

Or see this region's nucleotide sequence