Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6103

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14470 and 14471 are separated by 573 nucleotides14471 and 14472 are separated by 363 nucleotides mRNA_6102: 14470 - K14827 IPI1, TEX10 pre-rRNA-processing protein IPI1, at 1,660,120 to 1,663,221 14470 mRNA_6103: 14471 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 1,663,795 to 1,664,238 14471 mRNA_6104: 14472 - Hypothetical Protein, at 1,664,602 to 1,665,579 14472

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,663,189 - -0.4
1,663,259 - +0.4
1,663,290 - +0.4
1,663,291 - -0.3
1,663,292 - +0.4
1,663,437 + -2.0
1,663,439 - +0.0
1,663,443 + -0.2
1,663,450 + +0.8
1,663,453 - -0.6
1,663,453 - +0.9
1,663,456 + -0.7
1,663,464 + -2.0
1,663,558 - -2.4
1,663,572 - +1.2
1,663,590 - +0.5
1,663,602 + -0.3
1,663,645 + -0.4
1,663,723 + -0.4
1,663,737 - -1.0
1,663,738 + +0.7
1,663,739 + +0.4
1,663,913 - 14471 mRNA_6103 0.27 -0.2
1,663,916 + 14471 mRNA_6103 0.27 -0.8
1,664,029 - 14471 mRNA_6103 0.53 -0.0
1,664,468 - +0.9
1,664,887 - 14472 mRNA_6104 0.29 -1.5
1,664,928 - 14472 mRNA_6104 0.33 -0.1

Or see this region's nucleotide sequence