Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6115

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14482 and 14483 are separated by 363 nucleotides14483 and 14484 are separated by 400 nucleotides mRNA_6114: 14482 - Hypothetical Protein, at 25,220 to 26,095 14482 mRNA_6115: 14483 - Hypothetical Protein, at 26,459 to 27,455 14483 mRNA_6116: 14484 - Hypothetical Protein, at 27,856 to 28,790 14484

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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25,495 + 14482 mRNA_6114 0.31 -1.8
25,675 + 14482 mRNA_6114 0.52 -0.6
25,801 - 14482 mRNA_6114 0.66 -1.2
26,028 - -0.5
26,111 - -0.6
26,132 - -0.7
26,139 + +0.1
26,438 + -0.3
26,739 + 14483 mRNA_6115 0.28 +0.0
26,741 - 14483 mRNA_6115 0.28 +0.6
26,865 + 14483 mRNA_6115 0.41 -0.3
26,871 - 14483 mRNA_6115 0.41 -0.2
26,872 + 14483 mRNA_6115 0.41 +0.6
26,877 - 14483 mRNA_6115 0.42 -0.2
26,898 + 14483 mRNA_6115 0.44 +0.8
26,996 - 14483 mRNA_6115 0.54 +0.0
27,001 - 14483 mRNA_6115 0.54 -0.6
27,004 - 14483 mRNA_6115 0.55 -0.6
27,009 - 14483 mRNA_6115 0.55 +0.2
27,058 - 14483 mRNA_6115 0.60 +1.3
27,134 - 14483 mRNA_6115 0.68 -0.1
27,139 - 14483 mRNA_6115 0.68 +0.8
27,163 - 14483 mRNA_6115 0.71 -0.1
27,219 + 14483 mRNA_6115 0.76 -0.9
27,341 - 14483 mRNA_6115 0.88 +0.1
27,346 + 14483 mRNA_6115 0.89 +0.4
27,377 + -0.5
27,381 + -2.1
27,511 + +0.3
27,735 - +0.1
27,934 - +0.5
28,046 - 14484 mRNA_6116 0.20 -0.0
28,058 - 14484 mRNA_6116 0.22 +1.7
28,064 + 14484 mRNA_6116 0.22 -0.4
28,217 + 14484 mRNA_6116 0.39 +0.3
28,231 + 14484 mRNA_6116 0.40 +0.7
28,250 + 14484 mRNA_6116 0.42 +0.2

Or see this region's nucleotide sequence