Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6234

Experiment: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14602 and 14603 are separated by 416 nucleotides mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718 14602 mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318,135 to 318,876 14603

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
315,055 - -1.2
315,070 + -0.2
315,070 + +0.4
315,335 + -1.4
315,342 - +0.3
315,345 - -1.5
315,346 + -0.5
315,346 + -0.2
315,372 - -0.9
315,381 - +0.7
315,385 - -1.5
315,486 + +1.4
315,517 + -0.8
315,527 + +0.8
315,539 + +1.5
315,578 - -2.4
315,638 - -0.2
315,652 - +0.4
315,656 - +0.8
315,662 + -1.1
315,665 + -0.3
315,665 - -0.1
315,667 - -0.3
315,670 + -0.2
315,671 + +0.2
315,673 + -0.4
315,673 + +0.9
315,676 + +0.8
315,686 - -1.2
315,939 - 14602 mRNA_6234 0.10 +1.2
315,967 + 14602 mRNA_6234 0.12 -0.1
315,986 + 14602 mRNA_6234 0.13 -0.6
316,121 + 14602 mRNA_6234 0.20 -0.1
316,392 - 14602 mRNA_6234 0.33 +0.0
316,418 + 14602 mRNA_6234 0.35 -0.5
316,850 - 14602 mRNA_6234 0.56 -0.1
316,874 + 14602 mRNA_6234 0.57 -0.5
316,880 + 14602 mRNA_6234 0.58 -1.3
317,036 - 14602 mRNA_6234 0.66 -0.1
317,036 - 14602 mRNA_6234 0.66 -0.1
317,601 + -0.1
317,770 - -0.5

Or see this region's nucleotide sequence