Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6305

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485,457 to 486,370 14673

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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484,457 + +0.2
484,489 - -0.8
484,504 - +0.7
484,505 + +0.3
484,520 + -0.9
484,523 + +0.3
484,629 - -0.4
484,650 - +1.2
484,660 + +1.3
484,660 - +0.6
484,666 - -0.5
484,673 - +0.6
484,711 + -0.3
484,724 + -3.5
484,756 + +0.4
484,758 + +0.4
484,758 + +0.9
484,773 - -0.4
484,773 - +0.5
484,774 + -0.1
484,781 + -0.6
484,792 - -0.6
484,793 - +0.6
484,868 + +0.2
484,882 + -0.6
485,372 - +1.1
485,931 - 14673 mRNA_6305 0.52 +0.4
486,122 + 14673 mRNA_6305 0.73 -2.7
486,333 - +0.0
486,381 + -1.4
486,423 - -0.1
486,426 - -0.7
486,564 - +0.1
486,641 + -1.0
486,657 - -1.3
486,779 - +0.9
486,782 - +1.7
486,812 + +0.2
486,957 + +0.0
486,962 - -0.8
486,963 + +0.8
486,980 - +0.6
486,981 + -0.6
487,111 + +1.6
487,247 - +0.5

Or see this region's nucleotide sequence