Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6349

Experiment: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14716 and 14717 are separated by 143 nucleotides14717 and 14718 are separated by 575 nucleotides mRNA_6348: 14716 - K11373 ELP1, IKI3, IKBKAP elongator complex protein 1, at 601,835 to 607,122 14716 mRNA_6349: 14717 - BLAST NADH dehydrogenase [ubiquinone] 1 beta subcomplex..., at 607,266 to 607,793 14717 mRNA_6350: 14718 - K01749 hemC, HMBS hydroxymethylbilane synthase, at 608,369 to 610,484 14718

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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606,922 + +0.2
607,072 - +0.5
607,107 + -1.4
607,197 + -0.4
607,202 - -1.9
607,223 - +0.1
608,075 - +1.0
608,086 - +0.4
608,122 + +0.7
608,123 + -0.7
608,139 + -0.1
608,297 - -0.9

Or see this region's nucleotide sequence